Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857129.1_cds_XP_016513345.1_25899
CDS Infomation

[gene=LOC107830338] [db_xref=GeneID:107830338] [protein=uncharacterized WD repeat-containing protein C17D11.16-like] [protein_id=XP_016513345.1] [location=join(2208..2326,2857..3056,3484..3560,3654..3749,3852..3978,4752..4810,4887..4952,9278..9348,9448..9544,9798..9872,9986..10084,10664..10807,10883..10912,11013..11075,11221..11298,11402..11485)] [gbkey=CDS]
Sequence

ATGATAGCAGCTATTTCGTGGGTTCCCAAAGGGGTTGCCAAGGCAGTTCCAGCCGCGGTT
GAGCCCCCTTCAAAGGAAGAAATCGAGGAGCTTTTGAAGTGTGGCCTCCTTGATAAAAGT
GAAGATAGTGATAATGAGGAAGCTGAAGAAGATATGAATGTTGATGAATCCAAGGAAAAC
GAGGATGATGAAGTTGCTGTTGCATTAGCAGCTGCTAATGCACTTGGAAAAGCTACAAAA
GATGTCTCTCCAGAAACTGATAACATAACAAATGGTTTAAAGGAATTGAAGATGGAAAAC
TACGATGATGAGGAGGATGGCATTGAGCTTTTCGGTTCGGGACTCAAAGACTTGTACTAC
CCAAGTAATGACATGGACCCATATCTCAAGGATAAGGACAGTGACTCAGAGGAGGATGAG
GATATGACAATAAAGCCTGATGATTCTATTATAGTTTGTGCAAGCAATGATGATGATGTC
AGTCATCTTGAGATTTGGATTTTGGAAGTTTTATCAGATGGTACTGTAAACATGTATGTT
CATCATGAGATTATTATTCCTGCGTTTCCTCTCTGCACAGCATGGCTCGATTGCCCTATT
AAAAGTGACGAGGGGAAAGGGAACTTCATAGCTGTGGGCTCAATGGAACTAGCAATTGAA
ATTTGGGACCTAGACATATTGGATGAGGTGCAACCAGCTGCTGTATTAGGTGGAATCGCT
GACATAAAGAAAAAGGGGAAGAAGAAAACCATCAAATACAAAAAGGATAGCCACTCCGAT
TCAGTACTTGCTCTCGCTTGGAACAAGGAATATAGGAATATGCTTGCCAGTGCTAGTGCT
GATCAATCAGTCAAGGTTTGGGATGTGAATACCAGAAGCTGTACTGTCACTATGAACGAC
CATACTGACAAGGTTCAAGCAGTTGCATGGAATCCATTTGCATCACAGATTCTTCTGAGT
GGGTCATTTGATCATACAGTTTGCTTGAAGGATGTGAGGTATCCATCTCACAGTGGATAT
AAGTTTCCAGTTTCCGCTGACGTTGAAAGCTTGGCTTGGGATCCACATTCTGAGCATTCA
TTTGTGGTCAGCTTGGAGAATGGTACAGTTACTAGTTTTGATATCCGTGCTGCTAGTTCT
GATTCGAGTTCTGCGACAAAGCCAAGTTTCACCATCCATGCTCATGATAAAGCAGTGTCC
TCGATGTCCTTTAATCCTCTAGTCCCAAATCTTCTTGCAACTGGTTCCACGGACAAGATG
GTTAAACTATGGGATCTGAGCAACAATCAACCTTCTTGTATTGCATCAAGGAATCCAAAA
GCCGGAGCTGTCTTCTCTGTTTCCTTCTCAGATGATTGCCCCTTTTTTCTTGCTATTGGT
GGTTCTAAAGGGAAGTTGCAGCTATGGGATGTTTCTTCAGAAGATGCGGTGTTGAAGAAA
TATGGGAAATATGTCGCGCAAAAAGGGCCGTTGCCCAAATCATAA

Peptide Sequence

PEP ID

XP_016513345.1
PEP Infomation

PREDICTED: uncharacterized WD repeat-containing protein C17D11.16-like [Nicotiana tabacum]
Sequence

MIAAISWVPKGVAKAVPAAVEPPSKEEIEELLKCGLLDKSEDSDNEEAEEDMNVDESKEN
EDDEVAVALAAANALGKATKDVSPETDNITNGLKELKMENYDDEEDGIELFGSGLKDLYY
PSNDMDPYLKDKDSDSEEDEDMTIKPDDSIIVCASNDDDVSHLEIWILEVLSDGTVNMYV
HHEIIIPAFPLCTAWLDCPIKSDEGKGNFIAVGSMELAIEIWDLDILDEVQPAAVLGGIA
DIKKKGKKKTIKYKKDSHSDSVLALAWNKEYRNMLASASADQSVKVWDVNTRSCTVTMND
HTDKVQAVAWNPFASQILLSGSFDHTVCLKDVRYPSHSGYKFPVSADVESLAWDPHSEHS
FVVSLENGTVTSFDIRAASSDSSSATKPSFTIHAHDKAVSSMSFNPLVPNLLATGSTDKM
VKLWDLSNNQPSCIASRNPKAGAVFSVSFSDDCPFFLAIGGSKGKLQLWDVSSEDAVLKK
YGKYVAQKGPLPKS

Transcript Sequence

Gene sequence data has not been registered.